I believe unless you connect R3 and R9 directly to their respective MOSFET pins, the MOSFETs will oscillate. Oscillation may cause the circuit to draw much more current than normal, potentially heating things up and perhaps exceeding the power supply's current rating.
There could be other reasons, but assuming you're not just unlucky in buying the Cisco power supply, drawing too much current could cause what you're experiencing. I doubt that it's a direct short; that would cause things to react much more quickly.
On the other hand, it's not unheard of to have a bad power supply, In selling all the SSMH kits I have, I've run across 2 or 3 dead power supplies. That's not many by comparison to the numbers I sold. Still, all of the Cisco power supplies are used, so defects should be expected every once in a while. Happening twice to you? That's not likely, but still possible.
Interesting, can I test the current with the multimeter? At what point would be best?
The mosfets are connected with cables to the pcb, maybe I should connect them directly to the pcb.