Thanks for all your responses. I will try feeding it some files and waiting for a week or two.
I do see a basis for investigating different sources. The BluSound app says that the Node X recognises the Amanero USB interface on the R7HE3, but it behaves differently to the Matrix. For example, options like clock trim, fixed volume etc do not appear (like they do for the Matrix). Instead there is a volume limiter, and the Node X doesn't even recognise that there's a fixed volume out to the DAC.
The AES connection from the CD transport seems to have similar issues, but I don't have access to the same tracks on CD as I have on Roon (which is what I am using the Node X for).
It's been a long journey since I registered for this site way back in 2008 (as
@OCC7N mentioned above). Back then I scoured this site and bought a Benchmark DAC and an AKG 701. The dac went years ago as I got into portable audio, but I have kept the headphone - which my kids now use at times plugged into a pre-amp/headphone amp that is part of my current set up. This year I bought a Yamaha system that I've been working towards for a few years - it includes a Yamaha speaker, amp and pre-amp set that until the arrival of this R7HE3 was mostly used to play vinyl. Broken sound or not, my daughter is still listening to Taylor Swift and she's happy.