The RCA "noise" is indeed ground loop noise - and ground noise brought in from USB cable through your DAC, in my case I was able to solve the noise issues with cables designed to reject noise - the shield is used as a "faraday cage" wired to ground at the source end but left to float on the A90 end - and the cable wires are twisted pair - 2 pair - with shielding on top of that to prevent EMI noise. Then the USB cable has 2 ferrite cores - one on each end - and after replacing my "high end" cables with those better shielded (and cheaper!) cables I only have noise on RCA at the extreme end of A90 amplification - H Gain @ 75% volume, which I'll never see in normal use.
You want to keep the cables short, and it can be tough to find the 1ft cables, but keep looking on Amazon and they will restock.
I used "Worlds Best Cables" built with Mogami 2534 4-wire XLR and RCA 1ft cables, but WBC builds other wire brands that may do the same or better - or worse - so check specs for other wire before buying.
I was told Mogami 2549 2-wire sounds better - while the Mogami 2534 has better noise rejection, and I bought them too, but I haven't tried the 2549 cables yet. I'm giving the 2534 wire more than the recommended 175 hour burn in before switching to 2549 for A-B testing.
Here's my original posts with links:
https://www.head-fi.org/threads/topping-a90.927412/post-15789465
Here's the current 1ft listings + USB, they are currently in stock - note I set my A90 / D90 MQA side by side and these cables reach fine.
1 Foot – Directional Quad High-Definition Audio Interconnect Cable Pair Custom Made by WORLDS BEST CABLES – Using Mogami 2534 Wire and Amphenol ACPR Die-Cast, Gold Plated RCA Connectors
https://www.amazon.com/Foot-Directional-High-Definition-Interconnect-Connectors/dp/B01ALHTVMO
I also run the XLR cables with 2534 between the D90 MQA and A90 for A/B comparison between the XLR and RCA - and I found the RCA route is almost 1dB less volume than the XLR position on the A90 with both RCA and XLR runs using WBC 2534 wires. XLR sounds better to me, but that 1dB difference comes in handy sometimes with sensitive IEM's - I run he D90 in PRE mode @ -15.0 with those same IEM's. Remember you need to order 2 XLR cables, but the RCA's come packed as a pair.
1 Foot – Quad Balanced Microphone Cable Custom Made by WORLDS BEST CABLES – Using Mogami 2534 Wire and Neutrik NC3MXX-B Male & NC3FXX-B Female XLR Plugs.
(order 2!)
https://www.amazon.com/Foot-Balanced-Microphone-NC3MXX-B-NC3FXX-B/dp/B00WU1BP10
To reduce noise induced onto the power wires of the USB which transfers through the DAC ground either get a cable built / tested with the appropriate ferrite cores - or look for "real" ferrite cores to clip on to your favorite USB cable, this Tripp Lite cable was designed with the spurious nose rejection in mind, and is cheap to boot - and sounds good too as compared to my original "audiophile" USB cable:
Tripp Lite USB 2.0 Hi-Speed A/B Cable with Ferrite Chokes (M/M) 3-ft. (U023-003)
https://www.amazon.com/Tripp-Lite-Hi-Speed-Ferrite-U023-006/dp/B008VOPCGY
If you find cables that work for you please share them here on Head-fi