Hi music_man,
A few questions first to satisfy curiosity first...
What subs do you have & how many drivers does each have, are they identical subs & also what size subs, also what power output, impedance?
What is the frequency response range on the subs & what are they set to?
Please define what you mean by crossover is set to be for loudspeakers?
What do you mean by volume is set very low as this can be subjective. On a sub, anything below the quarter mark is considered 'low volume', 'average volume' on a sub's volume control is halfway. Most subs don't need more than half though like all audio components, this is VERY SOURCE DEPENDANT...
Are both sub inputs controlled further by an external volume control (eg, amplifier, computer audio interface, etc)?
(A screenshot of the rear panel or wherever the connections are would help the second question)
As a general rule, subs have a lower frequency response range than speakers & being tuned for lower frequencies, (hence their purpose), the driver itself doesn't require much physical movement to produce deep bass especially if it's a big driver above 12 inch. Also, regardless of how many drivers & driver size, depending on how much output power & impedence each sub have makes A LOT of difference, much like high efficiency headphones & speakers, headphones more so as the easier it is for an audio signal to be driven on low impedance than high...
Also, in your opinion, define low end subs too, please
Hope this helps.