It is very easy to do, just remember the goal is to completely damp all resonance, however subtle, of the frame of the headphones. The other component which is critical is the shape and density of the earpads and the distance between your ear and the driver of the can. Joe Grado was adamant about the design of the original flats. I pleaded with him to make something more comfortable, and he talked about how critical that particular design choice was and that nothing else would do, if you really wanted the best audio quality. The headband pad and extension of the standoffs minimizes the lateral pressure on your ears without compromizing the sound quality, greatly enhancing the comfort of the phones. The damping greatly improves the midband and midbass clarity and transparency of the can.
Re the flat pads... Since they're no longer available, I've found that reversing the bowls works pretty well as a replacement. Because of the mods to the headband geometry, comfort is not an issue.