To say the truth, at least half of those "upgrades" are pretty meaningless and "audiophile" in nature.
Yes, replacing rectifiers with HEXFREDs is nice, but as this is solid-state, it's not overly important.
Filter caps : stock are Panasonic FK, which are damn good. Anything above that line is mostly "audiophile" with no posted specs.
"Power Delivery" : not even sure what that means, probably a little PSU bypassing, this could be good or it could do virtually nothing, depends how stock is.
Dac Filtering : I'm guessing simple PSU bypassing, same as above
Voltage regulators : really depends on what the upgrade is, could be virtually meaningless if it's already a decent regulator or it could mean the world depending on how serious you get.
AC-coupling : this is a HUGE topic, I can't get into it without really knowing the original and modified circuits.
Digital input coupling : I'm guessing pulse transformer upgrade - depends on what's in there and what it's replaced by, can't imagine a huge deal.
Opamps : while OPA627 are super expensive, there are much better chips, especially when considering their job - I/V, buffering, headphone driver, etc.
Superclock3 : no comment, I know nothing of this.